The Ruminant Telomere-to-Telomere (RT2T) Consortium

Theodore S Kalbfleisch; Stephanie D McKay; Brenda M Murdoch; David L Adelson; Diego Almansa-Villa; Gabrielle Becker; Linda M Beckett; María José Benítez-Galeano; Fernando Biase; Theresa Casey; Edward Chuong; Emily Clark; Shannon Clarke; Noelle Cockett; Christine Couldrey; Brian W Davis; Christine G Elsik; Thomas Faraut; Yahui Gao; Carine Genet; Patrick Grady; Jonathan Green; Richard Green; Dailu Guan; Darren Hagen; Gabrielle A Hartley; Mike Heaton; Savannah J Hoyt; Wen Huang; Erich Jarvis; Jenna Kalleberg; Hasan Khatib; Klaus-Peter Koepfi; James Koltes; Sergey Koren; Christa Kuehn; Tosso Leeb; Alexander Leonard; George E Liu; Wai Yee Low; Hunter McConnell; Kathryn McRae; Karen Miga; Michelle Mousel; Holly Neibergs; Temitayo Olagunju; Matt Pennell; Bruna Petry; Mirjam Pewsner; Adam M Phillippy; Brandon D Pickett; Paulene Pineda; Tamara Potapova; Satyanarayana Rachagani; Arang Rhie; Monique Rijnkels; Annie Robic; Nelida Rodriguez Osorio; Yana Safonova; Gustavo Schettini; Robert D Schnabel; Nagabhishek Sirpu Natesh; Morgan Stegemiller; Jessica Storer; Paul Stothard; Caleb Stull; Gwenola Tosser-Klopp; Germán M Traglia; Christopher K Tuggle; Curtis P Van Tassell; Corey Watson; Rosemarie Weikard; Klaus Wimmers; Shangqian Xie; Liu Yang; Timothy P L Smith; Rachel J O'Neill; Benjamin D Rosen

doi:10.1038/s41588-024-01835-2

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The Ruminant Telomere-to-Telomere (RT2T) Consortium

Journal article

Peer reviewed

The Ruminant Telomere-to-Telomere (RT2T) Consortium

Theodore S Kalbfleisch, Stephanie D McKay, Brenda M Murdoch, David L Adelson, Diego Almansa-Villa, Gabrielle Becker, Linda M Beckett, María José Benítez-Galeano, Fernando Biase, Theresa Casey, …

Nature Genetics, Vol.56, pp.1566-1573

08/05/2024

DOI: https://doi.org/10.1038/s41588-024-01835-2

Abstract

Telomere-to-telomere (T2T) assemblies reveal new insights into the structure and function of the previously 'invisible' parts of the genome and allow comparative analyses of complete genomes across entire clades. We present here an open collaborative effort, termed the 'Ruminant T2T Consortium' (RT2T), that aims to generate complete diploid assemblies for numerous species of the Artiodactyla suborder Ruminantia to examine chromosomal evolution in the context of natural selection and domestication of species used as livestock.Telomere-to-telomere (T2T) assemblies reveal new insights into the structure and function of the previously 'invisible' parts of the genome and allow comparative analyses of complete genomes across entire clades. We present here an open collaborative effort, termed the 'Ruminant T2T Consortium' (RT2T), that aims to generate complete diploid assemblies for numerous species of the Artiodactyla suborder Ruminantia to examine chromosomal evolution in the context of natural selection and domestication of species used as livestock.

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Title: The Ruminant Telomere-to-Telomere (RT2T) Consortium
Creators: Theodore S Kalbfleisch
Stephanie D McKay - University of Missouri
Brenda M Murdoch - University of Idaho
David L Adelson - University of Adelaide
Diego Almansa-Villa - Universidad de la República
Gabrielle Becker - University of Idaho
Linda M Beckett - Purdue University West Lafayette
María José Benítez-Galeano - Universidad de la República
Fernando Biase - Virginia Tech
Theresa Casey - Purdue University West Lafayette
Edward Chuong - University of Colorado Boulder
Emily Clark - Roslin Institute
Shannon Clarke - AgResearch
Noelle Cockett - Utah State University
Christine Couldrey - Livestock Improvement Corporation
Brian W Davis - Texas A&M University
Christine G Elsik - University of Missouri
Thomas Faraut - Génétique Physiologie et Systèmes d'Elevage
Yahui Gao - Agricultural Research Service
Carine Genet - Génétique Physiologie et Systèmes d'Elevage
Patrick Grady - University of Connecticut
Jonathan Green - University of Missouri
Richard Green - University of Connecticut
Dailu Guan - University of California, Davis
Darren Hagen - Oklahoma State University
Gabrielle A Hartley - University of Connecticut
Mike Heaton
Savannah J Hoyt - University of Connecticut
Wen Huang - Michigan State University
Erich Jarvis - Rockefeller University
Jenna Kalleberg - University of Missouri
Hasan Khatib - University of Wisconsin–Madison
Klaus-Peter Koepfi
James Koltes - Iowa State University
Sergey Koren - National Human Genome Research Institute
Christa Kuehn
Tosso Leeb - University of Bern
Alexander Leonard - ETH Zurich
George E Liu - Agricultural Research Service
Wai Yee Low - University of Adelaide
Hunter McConnell - University of Missouri
Kathryn McRae - AgResearch
Karen Miga - University of California, Santa Cruz
Michelle Mousel - Washington State University
Holly Neibergs - Washington State University
Temitayo Olagunju - University of Idaho
Matt Pennell
Bruna Petry - Iowa State University
Mirjam Pewsner - University of Bern
Adam M Phillippy - National Human Genome Research Institute
Brandon D Pickett - National Human Genome Research Institute
Paulene Pineda - University of Adelaide
Tamara Potapova - Stowers Institute for Medical Research
Satyanarayana Rachagani - University of Missouri Health System
Arang Rhie - National Human Genome Research Institute
Monique Rijnkels - Texas A&M University
Annie Robic - Génétique Physiologie et Systèmes d'Elevage
Nelida Rodriguez Osorio
Yana Safonova - Pennsylvania State University
Gustavo Schettini - Virginia Tech
Robert D Schnabel - University of Missouri
Nagabhishek Sirpu Natesh
Morgan Stegemiller - University of Idaho
Jessica Storer - University of Connecticut
Paul Stothard - University of Alberta
Caleb Stull - University of Missouri
Gwenola Tosser-Klopp
Germán M Traglia - Universidad de la República
Christopher K Tuggle - Iowa State University
Curtis P Van Tassell - Agricultural Research Service
Corey Watson - University of Louisville
Rosemarie Weikard - Research Institute for Farm Animal Biology (FBN)
Klaus Wimmers - Research Institute for Farm Animal Biology (FBN)
Shangqian Xie
Liu Yang - Agricultural Research Service
Timothy P L Smith - Roman L. Hruska U.S. Meat Animal Research Center
Rachel J O'Neill
Benjamin D Rosen - Agricultural Research Service
Publication Details: Nature Genetics, Vol.56, pp.1566-1573
Publisher: Springer
Identifiers: 996696948901851
Academic Unit: Animal, Veterinary, and Food Sciences; Initiative for Bioinformatics and Evolutionary Studies; Institute for Modeling Collaboration and Innovation
Language: English
Resource Type: Journal article