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Field trial analyses of wheat and cassava benefit from spatial correction
Journal article   Open access   Peer reviewed

Field trial analyses of wheat and cassava benefit from spatial correction

Tesfahun Alemu Setotaw, Christine Mwende Nyaga, David James Waring, Jianli Chen, Chiedozie Egesi, Katherine Frels, Lucia Gutierrez, Jinha Jung, Michael Kanaabi, Margaret Krause, …
PloS one, Vol.21(8), e0354968
08/01/2026
PMID: 42616763

Abstract

Genotype Manihot - genetics Manihot - growth & development Manihot - microbiology Models, Genetic Models, Statistical Plant Diseases - genetics Plant Diseases - microbiology Triticum - genetics Triticum - growth & development Triticum - microbiology
Spatial variation is a major source of error in agricultural field experiments affecting genotype performance prediction. Implementing statistical models that account for spatial effects can improve the prediction of genotype performance. This study evaluated the impact of the P-spline spatial correction method on the estimation of genetic parameters and AIC values in two distinct crops, wheat and cassava, using four models: Block, Block + Spatial, Block + Marker, and Block + Marker + Spatial. Analyses were performed on data from 115 and 68 trials obtained from the T3/WheatCAP and Cassavabase databases, respectively. As assessed using Cullis heritability estimates and AIC values, the results demonstrated that correcting for spatial variation improved analyses of grain yield, test weight, plant height, powdery mildew, stripe rust, and bacterial streak disease in wheat. Similar improvements were observed in cassava for dry matter content, dry yield, and plant height. However, no improvement was observed for cassava mosaic disease or bacterial blight. These results were consistent whether or not marker effects were fitted in the models. This study demonstrates that incorporating spatial correction into statistical analyses substantially improves the precision of variety evaluation. By accounting for field heterogeneity, spatial modeling complements experimental design and enhances the accuracy of treatment comparisons. Therefore, integrating robust experimental designs with appropriate spatial analyses is essential for achieving optimal precision and reliability in field trial evaluations.
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