Code from: Influence of Environmental Conditions at Spawning Sites and Migration Routes on Adaptive Variation and Population Connectivity in Chinook Salmon

Yara Alshwairikh; Shayla Kroeze; Jenny Olsson; Steve Stephens-Cardenals; William Swain; Lisette Waits; Rebekah Horn; Shawn Narum; Travis Seaborn

Dataset

Code from: Influence of Environmental Conditions at Spawning Sites and Migration Routes on Adaptive Variation and Population Connectivity in Chinook Salmon

Yara Alshwairikh, Shayla Kroeze, Jenny Olsson, Steve Stephens-Cardenals, William Swain, Lisette Waits, Rebekah Horn, Shawn Narum and Travis Seaborn

University of Idaho, Idaho EPSCoR, EPSCoR GEM3

05/24/2022

Abstract

chinook salmon (Oncorhynchus tshawytscha)

genome-environment associations (GEA)

Bioinformatics

Genomics

Wildlife

This repository contains all the scripts used to run GEA analyses, Neighbor-joining analysis, and create environmental datasets in <a href="https://doi.org/10.1002/ece3.8324">Alshwairikh et al. 2021</a> Environmental data and allele frequency matrix are available on Dryad: <a href="https://doi.org/10.5061/dryad.prr4xgxmn">https://doi.org/10.5061/dryad.prr4xgxmn</a> Data Use License None Specified Recommended Citation Alshwairikh YA, Kroeze SL, Olsson J, Stephens-C rdenas SA, Swain WL, Waits LP, Horn RL, Narum SR, Seaborn T. 2022. Code from: Influence of Environmental Conditions at Spawning Sites and Migration Routes on Adaptive Variation and Population Connectivity in Chinook Salmon. GitHub. <a href="https://github.com/YaraAlshw/LG_Chinook">https://github.com/YaraAlshw/LG_Chinook</a> Funding US National Science Foundation and Idaho EPSCoR: OIA-1757324 Bonneville Power Administration: BPA 2008-907-00

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Title: Code from: Influence of Environmental Conditions at Spawning Sites and Migration Routes on Adaptive Variation and Population Connectivity in Chinook Salmon
Creators: Yara Alshwairikh
Shayla Kroeze
Jenny Olsson
Steve Stephens-Cardenals
William Swain
Lisette Waits
Rebekah Horn
Shawn Narum
Travis Seaborn
Publisher: University of Idaho, Idaho EPSCoR, EPSCoR GEM3
Description other: Contact: Yara Alshwairikh (yara.alshwairikh@gmail.com)
Identifiers: 996765636201851
Academic Unit: Idaho Experimental Partnership to Stimulate Competitive Research
Language: English
Resource Type: Dataset